Hi Simon,
thank you for the reply. However, we went ahead and re-installed OpenSUSE 12.3 directly, so unfortunately, can't test the script changes you suggested at the moment.
However, I notice that on OpenSUSE 12.3, the benchmark experiment also has a (small) deprecation issue in the relevant ".leave" file in ~/precis_exp/precis_output line 287:
Code:
281 Ancillary updating completed at Fri 27 Jun 17:07:56 BST 2014
282 ---------------------------
283 Time taken by /home/precis/um/vn4.5/scripts/ancil_update:
284 **ANCIL_TIME: 133.45s real 131.44s user 0.79s system
285
286
287 Use of qw(...) as parentheses is deprecated at /home/precis/um/vn4.5/scripts/lbc_update line 156.
288 --------------------------------------------------------------------------------
289 LATERAL BOUNDARY CONDITION UPDATING ...
I'm not sure if its related, but another issue I am having is that the graphical runtime monitor window is not working (The Real time monitoring system states, "Graphical output not yet available" all through the simulation), so I am unable to see what is happening with the experiment. I tested CDAT and it works fine but just not with precis. I can't find the reason for this problem. Is there anything you can suggest please?
Again, I'm not sure if its relevant, but I note that there are some other warnings in the ".leave" file in ~/precis_exp/precis_output, eg "/home/precis/um/vn4.5/scripts/qsserver[877]: ct: not found" and "cannot access /home/precis/precis_expt/abcaa/*.gif":
beginning of section:
Code:
=====================================================
GCOM Version 3.8
MPI_mpich2
Using precision : 32bit INTEGERs and 32bit REALs
Built at Wed Dec 1 12:29:53 GMT 2010
=====================================================
OPEN: File /home/precis/precis_expt/abcaa/abcaaa.start.h8c10 to be Opened on Unit 21 Exists
OPEN: File /home/precis/precis_expt/abcaa/abcaaa.start.h8c10 to be Opened on Unit 21 Exists
OPEN: File /home/precis/precis_expt/ancil/abcaa/qrclim.ozone.abxsq to be Opened on Unit 30
Exists
OPEN: File /home/precis/precis_expt/ancil/abcaa/qrclim.sst.abxsq to be Opened on Unit 35 Ex
ists
OPEN: File /home/precis/precis_expt/ancil/abcaa/qrclim.sice.abxsq to be Opened on Unit 36 E
xists
OPEN: File /home/precis/precis_expt/ancil/abcaa/qrclim.so2dms.abxsq to be Opened on Unit 11
0 Exists
OPEN: File /home/precis/precis_expt/ancil/abcaa/qrclim.oxi.abxsq to be Opened on Unit 116 E
xists
OPEN: File /home/precis/precis_expt/abcaa/alabcin_abcaa to be Opened on Unit 95 Exists
CLOSE: WARNING: Unit 60 Not Opened
OPEN: File abcaaa.pah8dec to be Opened on Unit 60 Exists
CLOSE: WARNING: Unit 69 Not Opened
OPEN: File abcaaa.pjh8c20 to be Opened on Unit 69 does not Exist
OPEN: File abcaaa.pjh8c20 Created on Unit 69
OPEN: File abcaaa.pjh8c20 to be Opened on Unit 69 Exists
OPEN: File abcaaa.pjh8c20 to be Opened on Unit 69 Exists ........
....several hundred repetitions of last line, then...
Code:
.....
OPEN: File abcaaa.pah8dec to be Opened on Unit 60 Exists
OPEN: File abcaaa.dah8c20 to be Opened on Unit 22 Exists
OPEN: File /home/precis/precis_expt/tmp/abcaa.apsum1 to be Opened on Unit 23 does not Exist
OPEN: File /home/precis/precis_expt/tmp/abcaa.apsum1 Created on Unit 23
OPEN: File /home/precis/precis_expt/tmp/abcaa.apstmp1 to be Opened on Unit 24 Exists
CLOSE: WARNING: Unit 69 Not Opened
OPEN: File abcaaa.pjh8c30 to be Opened on Unit 69 Exists
/home/precis/um/vn4.5/scripts/qsserver[877]: ct: not found
ls: cannot access /home/precis/precis_expt/abcaa/*.gif: No such file or directory
ls: cannot access *Hrly-Mns.gif: No such file or directory
ls: cannot access *Daily-Mns.gif: No such file or directory
OPEN: File abcaaa.pjh8c30 to be Opened on Unit 69 Exists
OPEN: File abcaaa.pjh8c30 to be Opened on Unit 69 Exists....
Thank you,
Isabella